STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lnau_0141Leucine-rich repeat-containing protein (substrate of the Dot/Icm secretion system). (461 aa)    
Predicted Functional Partners:
Lnau_0001
Ankyrin repeat-containing protein.
  
     0.774
Lnau_0363
Hypothetical protein.
  
     0.774
Lnau_0393
Ankyrin repeat protein.
  
     0.774
Lnau_0441
Ankyrin repeats (3 copies).
  
     0.774
Lnau_1387
Eukaryotic huntingtin interacting protein B.
  
     0.774
Lnau_2173
Hypothetical protein.
  
     0.774
rhsC
Putative deoxyribonuclease RhsC.
  
     0.774
Lnau_2658
DNA-binding transcriptional dual regulator Crp.
  
     0.774
Lnau_0661
Protoporphyrinogen oxidase.
  
     0.773
Lnau_0877
LPS O-antigen length regulator.
  
     0.773
Your Current Organism:
Legionella nautarum
NCBI taxonomy Id: 45070
Other names: ATCC 49506, CCUG 44900, CIP 105270, DSM 21805, L. nautarum, NCTC 12375, NCTC 12932
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.