Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lnau_0327 | Lnau_0328 | Lnau_0327 | Lnau_0328 | Helix-turn-helix protein. | Hypothetical protein; HipA-like C-terminal domain. | 0.776 |
Lnau_0327 | Lnau_0329 | Lnau_0327 | Lnau_0329 | Helix-turn-helix protein. | Hypothetical protein. | 0.501 |
Lnau_0327 | hutH | Lnau_0327 | Lnau_0330 | Helix-turn-helix protein. | Histidine ammonia-lyase (Histidase). | 0.460 |
Lnau_0328 | Lnau_0327 | Lnau_0328 | Lnau_0327 | Hypothetical protein; HipA-like C-terminal domain. | Helix-turn-helix protein. | 0.776 |
Lnau_0328 | Lnau_0329 | Lnau_0328 | Lnau_0329 | Hypothetical protein; HipA-like C-terminal domain. | Hypothetical protein. | 0.640 |
Lnau_0328 | hutH | Lnau_0328 | Lnau_0330 | Hypothetical protein; HipA-like C-terminal domain. | Histidine ammonia-lyase (Histidase). | 0.460 |
Lnau_0329 | Lnau_0327 | Lnau_0329 | Lnau_0327 | Hypothetical protein. | Helix-turn-helix protein. | 0.501 |
Lnau_0329 | Lnau_0328 | Lnau_0329 | Lnau_0328 | Hypothetical protein. | Hypothetical protein; HipA-like C-terminal domain. | 0.640 |
Lnau_0329 | hutH | Lnau_0329 | Lnau_0330 | Hypothetical protein. | Histidine ammonia-lyase (Histidase). | 0.701 |
hutH | Lnau_0327 | Lnau_0330 | Lnau_0327 | Histidine ammonia-lyase (Histidase). | Helix-turn-helix protein. | 0.460 |
hutH | Lnau_0328 | Lnau_0330 | Lnau_0328 | Histidine ammonia-lyase (Histidase). | Hypothetical protein; HipA-like C-terminal domain. | 0.460 |
hutH | Lnau_0329 | Lnau_0330 | Lnau_0329 | Histidine ammonia-lyase (Histidase). | Hypothetical protein. | 0.701 |