Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lnau_0655 | Lnau_1962 | Lnau_0655 | Lnau_1962 | Non-ribosomal peptide synthase. | 2-acylglycerophosphoethanolamine acyltransferase. | 0.993 |
Lnau_0655 | Lnau_2394 | Lnau_0655 | Lnau_2394 | Non-ribosomal peptide synthase. | Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/Acyl-(acyl-carrier-protein) synthetase aas protein. | 0.994 |
Lnau_0655 | emrB | Lnau_0655 | Lnau_0965 | Non-ribosomal peptide synthase. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.467 |
Lnau_0655 | pheA | Lnau_0655 | Lnau_2517 | Non-ribosomal peptide synthase. | P-protein. | 0.443 |
Lnau_0967 | Lnau_2010 | Lnau_0967 | Lnau_2010 | Outer membrane efflux protein. | Hemolysin D. | 0.721 |
Lnau_0967 | Lnau_2327 | Lnau_0967 | Lnau_2327 | Outer membrane efflux protein. | Hemolysin D. | 0.619 |
Lnau_0967 | emrA_1 | Lnau_0967 | Lnau_0966 | Outer membrane efflux protein. | Multidrug efflux system. | 0.980 |
Lnau_0967 | emrA_2 | Lnau_0967 | Lnau_2188 | Outer membrane efflux protein. | Multidrug efflux system. | 0.894 |
Lnau_0967 | emrB | Lnau_0967 | Lnau_0965 | Outer membrane efflux protein. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.899 |
Lnau_1962 | Lnau_0655 | Lnau_1962 | Lnau_0655 | 2-acylglycerophosphoethanolamine acyltransferase. | Non-ribosomal peptide synthase. | 0.993 |
Lnau_1962 | Lnau_2394 | Lnau_1962 | Lnau_2394 | 2-acylglycerophosphoethanolamine acyltransferase. | Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/Acyl-(acyl-carrier-protein) synthetase aas protein. | 0.859 |
Lnau_1962 | emrB | Lnau_1962 | Lnau_0965 | 2-acylglycerophosphoethanolamine acyltransferase. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.498 |
Lnau_1962 | pheA | Lnau_1962 | Lnau_2517 | 2-acylglycerophosphoethanolamine acyltransferase. | P-protein. | 0.451 |
Lnau_2010 | Lnau_0967 | Lnau_2010 | Lnau_0967 | Hemolysin D. | Outer membrane efflux protein. | 0.721 |
Lnau_2010 | Lnau_2187 | Lnau_2010 | Lnau_2187 | Hemolysin D. | Outer membrane efflux lipoprotein. | 0.673 |
Lnau_2010 | emrA_1 | Lnau_2010 | Lnau_0966 | Hemolysin D. | Multidrug efflux system. | 0.457 |
Lnau_2010 | emrB | Lnau_2010 | Lnau_0965 | Hemolysin D. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.506 |
Lnau_2187 | Lnau_2010 | Lnau_2187 | Lnau_2010 | Outer membrane efflux lipoprotein. | Hemolysin D. | 0.673 |
Lnau_2187 | Lnau_2327 | Lnau_2187 | Lnau_2327 | Outer membrane efflux lipoprotein. | Hemolysin D. | 0.619 |
Lnau_2187 | emrA_1 | Lnau_2187 | Lnau_0966 | Outer membrane efflux lipoprotein. | Multidrug efflux system. | 0.888 |
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