Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lnau_0967 | Lnau_0970 | Lnau_0967 | Lnau_0970 | Outer membrane efflux protein. | Hypothetical protein. | 0.408 |
Lnau_0967 | ccmA | Lnau_0967 | Lnau_0968 | Outer membrane efflux protein. | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.440 |
Lnau_0967 | ccmB | Lnau_0967 | Lnau_0969 | Outer membrane efflux protein. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.440 |
Lnau_0967 | emrA_1 | Lnau_0967 | Lnau_0966 | Outer membrane efflux protein. | Multidrug efflux system. | 0.980 |
Lnau_0967 | emrB | Lnau_0967 | Lnau_0965 | Outer membrane efflux protein. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.899 |
Lnau_0970 | Lnau_0967 | Lnau_0970 | Lnau_0967 | Hypothetical protein. | Outer membrane efflux protein. | 0.408 |
Lnau_0970 | Lnau_0971 | Lnau_0970 | Lnau_0971 | Hypothetical protein. | Hypothetical protein. | 0.563 |
Lnau_0970 | ccmA | Lnau_0970 | Lnau_0968 | Hypothetical protein. | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.714 |
Lnau_0970 | ccmB | Lnau_0970 | Lnau_0969 | Hypothetical protein. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.714 |
Lnau_0970 | emrA_1 | Lnau_0970 | Lnau_0966 | Hypothetical protein. | Multidrug efflux system. | 0.401 |
Lnau_0970 | emrB | Lnau_0970 | Lnau_0965 | Hypothetical protein. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.401 |
Lnau_0971 | Lnau_0970 | Lnau_0971 | Lnau_0970 | Hypothetical protein. | Hypothetical protein. | 0.563 |
Lnau_0971 | ccmA | Lnau_0971 | Lnau_0968 | Hypothetical protein. | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.523 |
Lnau_0971 | ccmB | Lnau_0971 | Lnau_0969 | Hypothetical protein. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.523 |
ccmA | Lnau_0967 | Lnau_0968 | Lnau_0967 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Outer membrane efflux protein. | 0.440 |
ccmA | Lnau_0970 | Lnau_0968 | Lnau_0970 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Hypothetical protein. | 0.714 |
ccmA | Lnau_0971 | Lnau_0968 | Lnau_0971 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Hypothetical protein. | 0.523 |
ccmA | ccmB | Lnau_0968 | Lnau_0969 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.999 |
ccmA | emrA_1 | Lnau_0968 | Lnau_0966 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Multidrug efflux system. | 0.428 |
ccmA | emrB | Lnau_0968 | Lnau_0965 | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Multidrug efflux system protein; Belongs to the major facilitator superfamily. | 0.428 |
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