Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lnau_1293 | Lnau_1294 | Lnau_1293 | Lnau_1294 | Sulfatase. | Peptide aspartate b-dioxygenase. | 0.803 |
Lnau_1293 | Lnau_1295 | Lnau_1293 | Lnau_1295 | Sulfatase. | Hypothetical protein. | 0.563 |
Lnau_1294 | Lnau_1293 | Lnau_1294 | Lnau_1293 | Peptide aspartate b-dioxygenase. | Sulfatase. | 0.803 |
Lnau_1294 | Lnau_1295 | Lnau_1294 | Lnau_1295 | Peptide aspartate b-dioxygenase. | Hypothetical protein. | 0.563 |
Lnau_1295 | Lnau_1293 | Lnau_1295 | Lnau_1293 | Hypothetical protein. | Sulfatase. | 0.563 |
Lnau_1295 | Lnau_1294 | Lnau_1295 | Lnau_1294 | Hypothetical protein. | Peptide aspartate b-dioxygenase. | 0.563 |
Lnau_1295 | Lnau_2557 | Lnau_1295 | Lnau_2557 | Hypothetical protein. | UBOX-containing protein. | 0.508 |
Lnau_1295 | atoB_2 | Lnau_1295 | Lnau_1296 | Hypothetical protein. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.449 |
Lnau_1295 | cysS | Lnau_1295 | Lnau_1151 | Hypothetical protein. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.412 |
Lnau_1295 | glnS | Lnau_1295 | Lnau_1150 | Hypothetical protein. | glutaminyl-tRNA synthetase. | 0.508 |
Lnau_2557 | Lnau_1295 | Lnau_2557 | Lnau_1295 | UBOX-containing protein. | Hypothetical protein. | 0.508 |
atoB_2 | Lnau_1295 | Lnau_1296 | Lnau_1295 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein. | 0.449 |
cysS | Lnau_1295 | Lnau_1151 | Lnau_1295 | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Hypothetical protein. | 0.412 |
cysS | glnS | Lnau_1151 | Lnau_1150 | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | glutaminyl-tRNA synthetase. | 0.861 |
glnS | Lnau_1295 | Lnau_1150 | Lnau_1295 | glutaminyl-tRNA synthetase. | Hypothetical protein. | 0.508 |
glnS | cysS | Lnau_1150 | Lnau_1151 | glutaminyl-tRNA synthetase. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.861 |