STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lnau_2191Sodium:dicarboxylate symporter protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (408 aa)    
Predicted Functional Partners:
Lnau_0005
Na /H -dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.744
flgF_1
Flagellar basal body rod protein FlgF.
    
   0.628
Lnau_2192
Methyltransferase.
       0.548
sdhD-2
Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
   
    0.525
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
   
    0.525
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein.
   
 
  0.476
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
  0.476
Lnau_1236
POT family transporter protein proton/peptide symporter.
  
   0.469
Lnau_1479
Integral membrane protein.
 
    0.436
Lnau_3034
Sensory box histidine kinase/response regulator.
     
 0.428
Your Current Organism:
Legionella nautarum
NCBI taxonomy Id: 45070
Other names: ATCC 49506, CCUG 44900, CIP 105270, DSM 21805, L. nautarum, NCTC 12375, NCTC 12932
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