Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lnau_0655 | Lnau_1782 | Lnau_0655 | Lnau_1782 | Non-ribosomal peptide synthase. | Polyketide synthase module. | 0.999 |
Lnau_0655 | Lnau_1865 | Lnau_0655 | Lnau_1865 | Non-ribosomal peptide synthase. | Ferredoxin reductase. | 0.790 |
Lnau_0655 | Lnau_2503 | Lnau_0655 | Lnau_2503 | Non-ribosomal peptide synthase. | 3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.824 |
Lnau_0655 | Lnau_2818 | Lnau_0655 | Lnau_2818 | Non-ribosomal peptide synthase. | Acetyoacetyl CoA reductase. | 0.824 |
Lnau_0655 | Lnau_2915 | Lnau_0655 | Lnau_2915 | Non-ribosomal peptide synthase. | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
Lnau_0655 | Lnau_3087 | Lnau_0655 | Lnau_3087 | Non-ribosomal peptide synthase. | Peptide synthetase, non-ribosomal. | 0.999 |
Lnau_0655 | Lnau_3141 | Lnau_0655 | Lnau_3141 | Non-ribosomal peptide synthase. | Acetyoacetyl CoA reductase. | 0.824 |
Lnau_0655 | fadB | Lnau_0655 | Lnau_1347 | Non-ribosomal peptide synthase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein. | 0.970 |
Lnau_0655 | rkpA | Lnau_0655 | Lnau_0662 | Non-ribosomal peptide synthase. | Type I polyketide synthase WcbR. | 0.999 |
Lnau_1782 | Lnau_0655 | Lnau_1782 | Lnau_0655 | Polyketide synthase module. | Non-ribosomal peptide synthase. | 0.999 |
Lnau_1782 | Lnau_1865 | Lnau_1782 | Lnau_1865 | Polyketide synthase module. | Ferredoxin reductase. | 0.786 |
Lnau_1782 | Lnau_2503 | Lnau_1782 | Lnau_2503 | Polyketide synthase module. | 3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.835 |
Lnau_1782 | Lnau_2818 | Lnau_1782 | Lnau_2818 | Polyketide synthase module. | Acetyoacetyl CoA reductase. | 0.835 |
Lnau_1782 | Lnau_2915 | Lnau_1782 | Lnau_2915 | Polyketide synthase module. | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
Lnau_1782 | Lnau_3087 | Lnau_1782 | Lnau_3087 | Polyketide synthase module. | Peptide synthetase, non-ribosomal. | 0.997 |
Lnau_1782 | Lnau_3141 | Lnau_1782 | Lnau_3141 | Polyketide synthase module. | Acetyoacetyl CoA reductase. | 0.835 |
Lnau_1782 | fadB | Lnau_1782 | Lnau_1347 | Polyketide synthase module. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein. | 0.807 |
Lnau_1782 | rkpA | Lnau_1782 | Lnau_0662 | Polyketide synthase module. | Type I polyketide synthase WcbR. | 0.999 |
Lnau_1865 | Lnau_0655 | Lnau_1865 | Lnau_0655 | Ferredoxin reductase. | Non-ribosomal peptide synthase. | 0.790 |
Lnau_1865 | Lnau_1782 | Lnau_1865 | Lnau_1782 | Ferredoxin reductase. | Polyketide synthase module. | 0.786 |
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