Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lnau_0655 | Lnau_1697 | Lnau_0655 | Lnau_1697 | Non-ribosomal peptide synthase. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.799 |
Lnau_0655 | Lnau_1782 | Lnau_0655 | Lnau_1782 | Non-ribosomal peptide synthase. | Polyketide synthase module. | 0.999 |
Lnau_0655 | Lnau_1865 | Lnau_0655 | Lnau_1865 | Non-ribosomal peptide synthase. | Ferredoxin reductase. | 0.790 |
Lnau_0655 | Lnau_2818 | Lnau_0655 | Lnau_2818 | Non-ribosomal peptide synthase. | Acetyoacetyl CoA reductase. | 0.824 |
Lnau_0655 | Lnau_2915 | Lnau_0655 | Lnau_2915 | Non-ribosomal peptide synthase. | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
Lnau_0655 | Lnau_3087 | Lnau_0655 | Lnau_3087 | Non-ribosomal peptide synthase. | Peptide synthetase, non-ribosomal. | 0.999 |
Lnau_0655 | atoB_1 | Lnau_0655 | Lnau_0465 | Non-ribosomal peptide synthase. | Acyl CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.799 |
Lnau_0655 | phaB2 | Lnau_0655 | Lnau_2819 | Non-ribosomal peptide synthase. | Acetyoacetyl CoA reductase. | 0.824 |
Lnau_0655 | rkpA | Lnau_0655 | Lnau_0662 | Non-ribosomal peptide synthase. | Type I polyketide synthase WcbR. | 0.999 |
Lnau_1697 | Lnau_0655 | Lnau_1697 | Lnau_0655 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Non-ribosomal peptide synthase. | 0.799 |
Lnau_1697 | Lnau_1782 | Lnau_1697 | Lnau_1782 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Polyketide synthase module. | 0.719 |
Lnau_1697 | Lnau_2818 | Lnau_1697 | Lnau_2818 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyoacetyl CoA reductase. | 0.726 |
Lnau_1697 | Lnau_2915 | Lnau_1697 | Lnau_2915 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.692 |
Lnau_1697 | Lnau_3087 | Lnau_1697 | Lnau_3087 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Peptide synthetase, non-ribosomal. | 0.719 |
Lnau_1697 | atoB_1 | Lnau_1697 | Lnau_0465 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.678 |
Lnau_1697 | phaB2 | Lnau_1697 | Lnau_2819 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyoacetyl CoA reductase. | 0.810 |
Lnau_1697 | rkpA | Lnau_1697 | Lnau_0662 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Type I polyketide synthase WcbR. | 0.735 |
Lnau_1782 | Lnau_0655 | Lnau_1782 | Lnau_0655 | Polyketide synthase module. | Non-ribosomal peptide synthase. | 0.999 |
Lnau_1782 | Lnau_1697 | Lnau_1782 | Lnau_1697 | Polyketide synthase module. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.719 |
Lnau_1782 | Lnau_1865 | Lnau_1782 | Lnau_1865 | Polyketide synthase module. | Ferredoxin reductase. | 0.786 |
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