STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaB2Acetyoacetyl CoA reductase. (248 aa)    
Predicted Functional Partners:
rkpA
Type I polyketide synthase WcbR.
  
 0.890
Lnau_1865
Ferredoxin reductase.
  
 0.890
Lnau_2818
Acetyoacetyl CoA reductase.
 
  
 
0.861
Lnau_2826
Poly-beta-hydroxybutyrate polymerase.
  
 
  0.839
Lnau_1782
Polyketide synthase module.
  
 0.835
Lnau_3087
Peptide synthetase, non-ribosomal.
  
 0.835
Lnau_0655
Non-ribosomal peptide synthase.
  
 0.824
Lnau_2915
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.811
atoB_1
Acyl CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.810
Lnau_1697
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.810
Your Current Organism:
Legionella nautarum
NCBI taxonomy Id: 45070
Other names: ATCC 49506, CCUG 44900, CIP 105270, DSM 21805, L. nautarum, NCTC 12375, NCTC 12932
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