STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_0017Hypothetical protein. (163 aa)    
Predicted Functional Partners:
Lpar_0018
Putative transposase.
     0.990
arcB_4
Sensory box histidine kinase/response regulator.
   
 0.802
arcB_3
Sensory histidine-kinase / response regulator.
   
 0.802
cph2_6
Regulatory protein (GGDEF and EAL domains).
    
 0.784
gmr_2
Regulatory protein (GGDEF domain).
    
 0.784
pheA_1
Chorismate mutase.
     
 0.757
letS_2
Legionella transmission sensor LetS.
   
 0.736
traI_1-2
Putative conjugative transfer protein TraI.
  
     0.729
letS_1
Legionella transmission sensor LetS.
    
 0.694
Lpar_0138
Uncharacterized protein; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
  
     0.687
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.