STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_0019Methyltransferase domain protein. (162 aa)    
Predicted Functional Partners:
Lpar_3635
Polyketide synthase.
   
 0.832
Lpar_1623
acyl-CoA synthetase.
   
 0.804
Lpar_3014
acyl-CoA synthetase.
  
 
 0.742
fkbM_1
Methoxymalonyl CoA synthase.
    
 0.731
Lpar_3636
Polyketide synthase.
    
 0.729
pksJ_4
Polyketide synthase, type I.
    
 0.729
pksJ_1
Polyketide synthase, type I.
    
 0.727
Lpar_3640
Polyketide synthase.
    
 0.705
Lpar_0017
Hypothetical protein.
 
     0.559
lgrD
Non-ribosomal peptide synthase.
     
 0.521
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.