STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_0047Putative conjugative transfer protein TraU. (325 aa)    
Predicted Functional Partners:
Lpar_0042
Putative conjugative transfer protein TraH.
 
   
 0.958
Lpar_0045
Conjugal transfer mating pair stabilization protein TraN.
 
   
 0.955
Lpar_0048
Putative conjugative transfer protein TraW.
 
   
 0.953
Lpar_0050
Putative conjugative transfer protein TraC.
 
   
 0.951
Lpar_0044
Putative conjugative transfer protein TraF.
 
     0.950
Lpar_0046
Putative conjugative transfer protein TrbC.
 
     0.940
Lpar_0041
Putative sex pilus assembly and mating pair protein TraG.
 
     0.939
Lpar_0043
Putative conjugative transfer protein TrbB.
 
     0.934
Lpar_0052
Putative conjugative transfer protein TraB.
 
     0.933
traD-2
Conjugative transfer protein TraD.
 
     0.861
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.