Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phbB_5Acetyoacetyl CoA reductase. (246 aa)    
Predicted Functional Partners:
fkbM_1
Methoxymalonyl CoA synthase.
  
 0.871
Lpar_1623
acyl-CoA synthetase.
  
 0.860
Lpar_3635
Polyketide synthase.
  
 0.846
phbC_1-2
Poly-beta-hydroxybutyrate synthase.
  
  
  0.794
fadI
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.790
yfcY
beta-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.790
fadA
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.790
atoB
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.790
Lpar_0389
Saframycin Mx1 synthetase B.
  
 0.771
Lpar_2203
O-methyltransferase.
 
   
  0.766
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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