STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_0349IcmF. (973 aa)    
Predicted Functional Partners:
Lpar_0350
IcmH (DotU).
 
 
 0.978
Lpar_1316
Protein IcmE (DotG).
 
   
 0.815
lvrA2
Vir region protein.
  
     0.761
Lpar_0853
Protein LvrA.
  
     0.755
Lpar_2145
Protein LvrA.
  
     0.748
Lpar_3354
Cysteine protease.
  
     0.744
lvrA
Protein LvrA.
  
     0.739
ompR
DNA-binding response regulator in two-component regulatory system with EnvZ.
      
 0.730
Lpar_2534
Hypothetical protein.
  
     0.729
Lpar_0321
Putative membrane protein YdgA-like protein.
  
     0.727
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.