STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_1007Protein kinase. (402 aa)    
Predicted Functional Partners:
arcB_4
Sensory box histidine kinase/response regulator.
     
 0.663
arcB_3
Sensory histidine-kinase / response regulator.
     
 0.663
Lpar_2079
Sensory box/GGDEF domain protein.
     
 0.646
Lpar_1450
Protein kinase domain protein.
  
     0.638
letS_2
Legionella transmission sensor LetS.
     
 0.624
Lpar_3096
Tubulin-tyrosine ligase family protein.
  
     0.609
arp_2
Ankyrin repeat protein.
  
     0.590
Lpar_1451
Ankyrin repeats (3 copies).
  
     0.589
Lpar_2308
Ectonucleoside triphosphate diphosphohydrolase.
  
     0.568
ribA_2
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.563
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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