STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
aacA4_2-2GNAT family acetyltransferase. (163 aa)    
Predicted Functional Partners:
frgA
Siderophore biosynthetic enzyme FrgA.
  
 
 0.802
pheA_1
Chorismate mutase.
    
  0.605
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
  0.586
pdhB_1
Pyruvate/2-oxoglutarate dehydrogenase subunit E1.
     
  0.571
pta_2
Phosphate acetyl/butaryl transferase.
    
 0.515
Lpar_0101
Aminoglycoside 3-N-acetyltransferase.
  
 
  0.492
Lpar_3133
Aminoglycoside 3-N-acetyltransferase.
  
 
  0.462
hcr
Oxidoreductase, FAD-binding protein.
     
  0.450
Lpar_1623
acyl-CoA synthetase.
  
 
 0.446
Lpar_1070
Ankyrin repeat protein.
       0.443
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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