STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_1090Hypothetical protein. (524 aa)    
Predicted Functional Partners:
chiA1
Glycosyl hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
  
 
 0.545
Lpar_2197
Type III restriction enzyme, res subunit.
  
 
 0.491
Lpar_1089
Hypothetical protein.
       0.463
Lpar_0398
Hypothetical protein.
   
 
 0.451
smc_1
Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.451
smc_3
Chromosome partition protein Smc.
   
 
 0.451
Lpar_0885
5'-nucleotidase.
   
 
 0.425
Lpar_0493
Calpain family cysteine protease.
   
 
 0.406
Lpar_1102
Coiled-coil protein.
   
 
 0.406
Lpar_1532
Hypothetical protein.
   
 
 0.406
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.