STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_1158Secreted protein. (395 aa)    
Predicted Functional Partners:
lepB_1
Signal peptidase I; Belongs to the peptidase S26 family.
   
 
 0.871
Lpar_0489
Protein kinase.
  
     0.637
Lpar_2394
Ankyrin repeats (3 copies).
  
 
   0.628
Lpar_1496
Secreted protein.
  
     0.621
Lpar_3063
Hypothetical protein.
  
     0.619
dapD_1
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
  
     0.581
smc_3
Chromosome partition protein Smc.
  
     0.574
pepP
Proline aminopeptidase P II.
   
 
 0.569
Lpar_2663
AIG2-like family protein.
   
 
 0.569
Lpar_2236
L-gulono-gamma-lactone oxidase.
  
     0.567
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.