STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_1237Coenzyme F390 synthetase FtsA. (421 aa)    
Predicted Functional Partners:
ahlD
Zn-dependent hydrolase GumP.
 
     0.949
Lpar_1239
3-beta hydroxysteroid dehydrogenase/isomerase.
 
     0.915
fabH_2-2
3-oxoacyl-ACP synthase.
 
     0.826
hcr
Oxidoreductase, FAD-binding protein.
  
 
 0.775
Lpar_2671
Hypothetical protein.
 
     0.650
Lpar_0100
Phosphotransferase enzyme family protein.
  
     0.618
Lpar_1946
Hypothetical protein.
  
     0.615
bamB
Outer membrane protein assembly factor BamB.
  
     0.606
aacA4_3
Aminoglycoside 6'-N-acetyltransferase.
  
     0.604
traI_1-2
Putative conjugative transfer protein TraI.
  
     0.601
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.