STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yadGTransporter subunit: ATP-binding component of ABC superfamily protein. (304 aa)    
Predicted Functional Partners:
yadH_2
ABC transporter permease.
 
 0.975
yadH_1
ABC transporter permease.
 
 0.879
Lpar_1255
2OG-Fe(II) oxygenase.
       0.611
Lpar_1256
Zinc metalloprotease.
       0.590
ybhS
ABC transporter permease.
 
 
 
  0.571
ybhR_1
ABC transporter permease.
 
 
 
  0.565
Lpar_0001
Hypothetical protein.
  
 
   0.552
ybhR_2
ABC transporter permease.
 
 
 
  0.538
Lpar_1623
acyl-CoA synthetase.
  
 
 0.515
Lpar_3635
Polyketide synthase.
  
 
 0.512
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.