STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybhR_1ABC transporter permease. (377 aa)    
Predicted Functional Partners:
ybhF_2
ABC transporter ATP-binding protein.
 
  0.983
ybhF_1
ABC transporter ATP-binding protein.
 
 
  0.944
mdtN_3
Hemolysin D.
 
  
 0.860
macA_1
Hemolysin D.
 
  
 0.791
Lpar_1266
Cyclic nucleotide-binding protein.
  
    0.774
ybhR_2
ABC transporter permease.
 
  
 
0.752
rbbA
ABC transporter ATP-binding protein.
  
 
 
0.655
drrA_4
ABC transporter ATP binding protein.
 
 
 
  0.613
ugpE
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
 0.577
yadG
Transporter subunit: ATP-binding component of ABC superfamily protein.
 
 
 
  0.565
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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