STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dotFComponent of the Dot/Icm secretion system. (276 aa)    
Predicted Functional Partners:
Lpar_1316
Protein IcmE (DotG).
   
 
 0.995
Lpar_1315
IcmK protein.
   
 
 0.953
lphA
LphA (DotK).
   
   0.931
dotC
Defect in organelle trafficking lipoprotein DotC.
    
 
 0.817
dotD
Lipoprotein DotD.
    
 
 0.814
yiaD_2
Lipoprotein.
   
   0.783
Lpar_1318
IcmC (DotE).
     
 0.780
Lpar_0637
Hypothetical protein.
    
   0.778
Lpar_1994
Neurogenic locus notch like protein precursor.
    
   0.778
Lpar_1314
Protein IcmL (DotI).
     
 0.766
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.