STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_1396Ankyrin repeat protein. (468 aa)    
Predicted Functional Partners:
Lpar_1623
acyl-CoA synthetase.
   
 0.962
Lpar_3635
Polyketide synthase.
  
 0.847
yjeA
Endo-1,4-beta-xylanase.
  
 
  0.833
Lpar_0585
cNMP-binding protein.
  
 0.822
bcp
Acetylpolyamine aminohydrolase.
  
 
  0.818
cpdA_2
Acid sphingomyelinase-like phosphodiesterase.
  
 
  0.796
udk_1
Uridine kinase.
  
 
  0.795
Lpar_3103
Sulfatase.
  
 
  0.793
menH_2
Putative lipase.
 
 
   0.791
Lpar_2236
L-gulono-gamma-lactone oxidase.
  
 
   0.788
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.