STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG_33-oxoacyl-ACP reductase. (251 aa)    
Predicted Functional Partners:
Lpar_1623
acyl-CoA synthetase.
  
 0.973
fabH_1
3-oxoacyl-ACP synthase.
 
 
  0.931
fabH1
3-oxoacyl-ACP synthase.
 
 
  0.931
fkbM_1
Methoxymalonyl CoA synthase.
  
 0.894
Lpar_3635
Polyketide synthase.
  
 0.878
pksJ_4
Polyketide synthase, type I.
 
 0.840
pksJ_2
Polyketide synthase, type I.
 
 0.839
pksJ_1
Polyketide synthase, type I.
 
 0.838
fadD3
Acyl CoA ligase.
  
  0.830
Lpar_3636
Polyketide synthase.
  
 0.819
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.