STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmoT_1Sigma 54-dependent response regulator. (229 aa)    
Predicted Functional Partners:
fixL
Sensor histidine kinase.
 
 0.945
arcB_4
Sensory box histidine kinase/response regulator.
 
 0.918
arcB_3
Sensory histidine-kinase / response regulator.
 
 0.916
Lpar_3615
Nitrogen regulation protein NR(II).
 
 0.900
kinB
Sensory box histidine kinase/response regulator.
 
 
 0.864
letS_2
Legionella transmission sensor LetS.
   
 0.851
cph2_6
Regulatory protein (GGDEF and EAL domains).
   
 0.833
gmr_2
Regulatory protein (GGDEF domain).
   
 0.833
letS_1
Legionella transmission sensor LetS.
 
 
 0.822
Lpar_2079
Sensory box/GGDEF domain protein.
 
 
  0.793
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.