STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adc_2Acetoacetate decarboxylase. (246 aa)    
Predicted Functional Partners:
bdhA
3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.792
Lpar_1075
Patatin-like phospholipase.
 
     0.717
Lpar_1937
Phospholipase, patatin family.
 
     0.694
Lpar_2175
Alpha-beta hydrolase family transporter esterase.
 
     0.590
Lpar_1543
Short chain dehydrogenase.
  
  
  0.487
Lpar_1939
Hypothetical protein.
       0.427
Lpar_1940
Hypothetical protein; Belongs to the UPF0276 family.
       0.427
Lpar_1997
Hypothetical protein.
  
  
  0.415
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.