Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lpar_1359 | Lpar_1941 | Lpar_1359 | Lpar_1941 | Transcriptional regulator; Belongs to the UPF0301 (AlgH) family. | Hypothetical protein. | 0.760 |
Lpar_1359 | ahpC_1 | Lpar_1359 | Lpar_0742 | Transcriptional regulator; Belongs to the UPF0301 (AlgH) family. | Alkyl hydroperoxide reductase. | 0.484 |
Lpar_1359 | ahpC_2 | Lpar_1359 | Lpar_1328 | Transcriptional regulator; Belongs to the UPF0301 (AlgH) family. | Alkyl hydroperoxide reductase. | 0.484 |
Lpar_1359 | rir1 | Lpar_1359 | Lpar_2423 | Transcriptional regulator; Belongs to the UPF0301 (AlgH) family. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.998 |
Lpar_1623 | Lpar_1941 | Lpar_1623 | Lpar_1941 | acyl-CoA synthetase. | Hypothetical protein. | 0.920 |
Lpar_1623 | Lpar_3635 | Lpar_1623 | Lpar_3635 | acyl-CoA synthetase. | Polyketide synthase. | 0.999 |
Lpar_1623 | ahpC_1 | Lpar_1623 | Lpar_0742 | acyl-CoA synthetase. | Alkyl hydroperoxide reductase. | 0.475 |
Lpar_1623 | ahpC_2 | Lpar_1623 | Lpar_1328 | acyl-CoA synthetase. | Alkyl hydroperoxide reductase. | 0.475 |
Lpar_1623 | coxB | Lpar_1623 | Lpar_0682 | acyl-CoA synthetase. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.773 |
Lpar_1623 | msrA_2 | Lpar_1623 | Lpar_0699 | acyl-CoA synthetase. | Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.575 |
Lpar_1623 | rir1 | Lpar_1623 | Lpar_2423 | acyl-CoA synthetase. | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.453 |
Lpar_1623 | sodC | Lpar_1623 | Lpar_1732 | acyl-CoA synthetase. | Superoxide dismutase, Cu, Zn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.472 |
Lpar_1941 | Lpar_1359 | Lpar_1941 | Lpar_1359 | Hypothetical protein. | Transcriptional regulator; Belongs to the UPF0301 (AlgH) family. | 0.760 |
Lpar_1941 | Lpar_1623 | Lpar_1941 | Lpar_1623 | Hypothetical protein. | acyl-CoA synthetase. | 0.920 |
Lpar_1941 | Lpar_3635 | Lpar_1941 | Lpar_3635 | Hypothetical protein. | Polyketide synthase. | 0.908 |
Lpar_1941 | ahpC_1 | Lpar_1941 | Lpar_0742 | Hypothetical protein. | Alkyl hydroperoxide reductase. | 0.824 |
Lpar_1941 | ahpC_2 | Lpar_1941 | Lpar_1328 | Hypothetical protein. | Alkyl hydroperoxide reductase. | 0.824 |
Lpar_1941 | coxB | Lpar_1941 | Lpar_0682 | Hypothetical protein. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.902 |
Lpar_1941 | lidC | Lpar_1941 | Lpar_2183 | Hypothetical protein. | Thiol:disulfide interchange protein DsbD. | 0.722 |
Lpar_1941 | msrA_2 | Lpar_1941 | Lpar_0699 | Hypothetical protein. | Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.993 |
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