STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_1998Dimethylaniline monooxygenase. (436 aa)    
Predicted Functional Partners:
Lpar_1997
Hypothetical protein.
       0.834
Lpar_1995
AraC family transcriptional regulator.
       0.747
nlhH_1
Lipase.
 
 
  0.703
xseA
Exonuclease VII large subunit.
       0.703
nlhH_2
Alpha/beta hydrolase.
 
 
  0.703
fadH
2,4-dienoyl-CoA reductase.
     
 0.644
Lpar_0697
Cytochrome P450.
 
 0.629
Lpar_1623
acyl-CoA synthetase.
  
 0.531
ptlI
Pentalenene oxygenase.
 
 0.502
lys
Saccharopine dehydrogenase.
  
     0.475
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.