STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_2012Anti-anti-sigma factor. (94 aa)    
Predicted Functional Partners:
ttg2D
Toluene tolerance protein Ttg2D.
  
 
 0.976
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
  
 0.961
yrbF
Toluene transporter subunit: ATP-binding component of ABC superfamily protein.
  
 0.949
yrbE
Toluene transporter subunit: membrane component of ABC superfamily protein.
  
 0.934
Lpar_0236
ABC transporter ATP binding protein.
  
 0.780
Lpar_0235
Mammalian cell entry related domain protein.
  
 0.731
mlaE_2
ABC transporter permease.
  
 0.716
kdsD
Arabinose 5-phosphate isomerase.
     
 0.641
lptB
Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein.
       0.583
lptA
OstA family protein.
       0.583
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.