STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hipA_2HipA protein, DNA binding regulator. (435 aa)    
Predicted Functional Partners:
hipB_1
Putative DNA-binding transcriptional regulator.
 
 
 0.968
hipA_3
HipA protein.
 
 
  
0.912
Lpar_0994
Hypothetical protein.
  
   0.567
pgdA_1
Polysaccharide deacetylase.
       0.473
Lpar_2072
Hypothetical protein.
       0.467
ctkA
Serine/threonine-protein kinase CtkA.
  
   
 0.431
ydcN
DNA-binding transcriptional regulator.
   
   0.410
lexA_3
Putative prophage repressor CI-like protein.
   
   0.410
Lpar_0989
HTH-type transcriptional regulator.
   
   0.410
Lpar_3159
Antitoxin HipB.
   
   0.410
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.