STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_2436Hypothetical protein. (186 aa)    
Predicted Functional Partners:
glnA
Glutamine synthetase.
       0.782
Lpar_2437
Hypothetical protein; Belongs to the UPF0246 family.
       0.760
pilF
Twitching motility protein PilF.
  
     0.693
lspF
Type II secretory pathway protein LspF.
       0.589
lspI
Type II secretory pathway protein LspI.
 
     0.579
lspH
Type II secretory pathway protein LspH.
 
     0.558
lspK
Type II secretory pathway protein LspK.
 
     0.555
lspJ
Type II secretory pathway protein LspJ.
 
     0.552
pilP
Tfp pilus assembly protein PilP.
  
     0.550
acdS
1-aminocyclopropane-1-carboxylate deaminase.
       0.546
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.