STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilBPilus assembly protein PilB. (572 aa)    
Predicted Functional Partners:
pilC
Pilus assembly protein PilC.
 
 
 0.996
lspF
Type II secretory pathway protein LspF.
 
 
 0.983
pilD
Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.974
Lpar_2329
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.938
pilN
Tfp pilus assembly protein PilN.
 
 
 0.921
pilZ_2
Type 4 fimbrial biogenesis protein PilZ.
  
 
 
 0.915
pilM
Tfp pilus assembly protein, ATPase PilM.
 
 
 0.825
lspG
Type II secretory pathway protein LspG.
 
 0.812
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
 
 
 0.810
lspI
Type II secretory pathway protein LspI.
  
 0.734
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.