Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lpar_3613 | copA_5 | Lpar_3613 | Lpar_2652 | Hypothetical protein. | Multicopper oxidase. | 0.975 |
Lpar_3613 | cueO | Lpar_3613 | Lpar_3290 | Hypothetical protein. | Multicopper oxidase. | 0.737 |
Lpar_3635 | copA_5 | Lpar_3635 | Lpar_2652 | Polyketide synthase. | Multicopper oxidase. | 0.816 |
Lpar_3635 | cueO | Lpar_3635 | Lpar_3290 | Polyketide synthase. | Multicopper oxidase. | 0.816 |
cadA_1 | copA_5 | Lpar_3235 | Lpar_2652 | Cadmium translocating P-type ATPase CadA. | Multicopper oxidase. | 0.856 |
cadA_1 | cueO | Lpar_3235 | Lpar_3290 | Cadmium translocating P-type ATPase CadA. | Multicopper oxidase. | 0.462 |
cadA_2 | copA_5 | Lpar_0149 | Lpar_2652 | Cadmium efflux ATPase. | Multicopper oxidase. | 0.868 |
cadA_2 | cueO | Lpar_0149 | Lpar_3290 | Cadmium efflux ATPase. | Multicopper oxidase. | 0.513 |
copA1 | copA_5 | Lpar_3224 | Lpar_2652 | Copper efflux ATPase. | Multicopper oxidase. | 0.891 |
copA1 | cueO | Lpar_3224 | Lpar_3290 | Copper efflux ATPase. | Multicopper oxidase. | 0.581 |
copA_1 | copA_5 | Lpar_1127 | Lpar_2652 | Cation transport ATPase. | Multicopper oxidase. | 0.869 |
copA_1 | cueO | Lpar_1127 | Lpar_3290 | Cation transport ATPase. | Multicopper oxidase. | 0.468 |
copA_5 | Lpar_3613 | Lpar_2652 | Lpar_3613 | Multicopper oxidase. | Hypothetical protein. | 0.975 |
copA_5 | Lpar_3635 | Lpar_2652 | Lpar_3635 | Multicopper oxidase. | Polyketide synthase. | 0.816 |
copA_5 | cadA_1 | Lpar_2652 | Lpar_3235 | Multicopper oxidase. | Cadmium translocating P-type ATPase CadA. | 0.856 |
copA_5 | cadA_2 | Lpar_2652 | Lpar_0149 | Multicopper oxidase. | Cadmium efflux ATPase. | 0.868 |
copA_5 | copA1 | Lpar_2652 | Lpar_3224 | Multicopper oxidase. | Copper efflux ATPase. | 0.891 |
copA_5 | copA_1 | Lpar_2652 | Lpar_1127 | Multicopper oxidase. | Cation transport ATPase. | 0.869 |
copA_5 | ctpV | Lpar_2652 | Lpar_0275 | Multicopper oxidase. | Heavy metal transporting P-type ATPase. | 0.852 |
copA_5 | cueO | Lpar_2652 | Lpar_3290 | Multicopper oxidase. | Multicopper oxidase. | 0.835 |
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