STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_2752Heat shock hsp20; Belongs to the small heat shock protein (HSP20) family. (194 aa)    
Predicted Functional Partners:
clpA
ATP binding protease component ClpA; Belongs to the ClpA/ClpB family.
   
 
 0.576
clpB
Endopeptidase Clp ATP-binding subunit B; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
   
 
 0.576
Lpar_2753
Carbonic anhydrase.
       0.554
crtK-2
Tryptophan-rich sensory protein.
  
    0.528
phrA
Deoxyribodipyrimidine photolyase phrB; Belongs to the DNA photolyase family.
       0.523
Lpar_2754
Bestrophin, RFP-TM, chloride channel.
       0.507
ankX_3
Ankyrin repeat protein.
    
   0.442
Lpar_0848
Ankyrin repeats (3 copies).
    
   0.442
legA
Ankyrin-repeat containing protein, substrate of the Dot/Icm secretion system.
    
   0.442
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.421
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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