STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_2851Cyclic nucleotide-binding domain protein. (213 aa)    
Predicted Functional Partners:
cyaB_1
Guanylate/adenylate cyclase.
 
 0.863
arcB_4
Sensory box histidine kinase/response regulator.
  
 0.845
arcB_3
Sensory histidine-kinase / response regulator.
  
 0.845
Lpar_3635
Polyketide synthase.
  
 0.843
kinB
Sensory box histidine kinase/response regulator.
  
 0.838
Lpar_1623
acyl-CoA synthetase.
  
 0.809
cyaA_2-2
Adenylate/guanylate cyclase transmembrane protein.
 
 0.805
Lpar_0411
Calcium-transporting ATPase.
  
  
  0.798
dapL
Aspartate aminotransferase.
  
  
  0.792
Lpar_2394
Ankyrin repeats (3 copies).
  
 
  0.786
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.