STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wzmABC transporter of LPS O-antigen, Wzm. (294 aa)    
Predicted Functional Partners:
wzt
ABC transporter of LPS O-antigen.
 
 0.999
Lpar_3019
Glycosyl transferase family protein.
 
  
 0.920
rbbA
ABC transporter ATP-binding protein.
    
 0.824
ugpE
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
  0.793
kfoC_2
Glycosyltransferase.
 
  
 0.723
ugpB
Glycerol-3-phosphate-binding periplasmic protein precursor.
     
 0.693
Lpar_3005
FtsX-like permease family protein.
 
     0.577
lolD_2
ABC transporter ATP binding protein.
   
   0.558
ubiG_2
3-demethylubiquinone-9 3-methyltransferase.
  
 
 0.545
aaeA_2
Hemolysin D.
       0.535
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.