Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lpar_3207Hypothetical protein. (162 aa)    
Predicted Functional Partners:
copA2
Copper efflux ATPase.
 
     0.789
atpC_2
F-type H -transporting ATPase epsilon chain.
  
     0.661
Lpar_0098
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.654
Lpar_0043
Putative conjugative transfer protein TrbB.
  
     0.646
Lpar_0100
Phosphotransferase enzyme family protein.
  
     0.633
Lpar_3192
ATP synthase protein I.
  
     0.624
bamB
Outer membrane protein assembly factor BamB.
  
     0.591
Lpar_0132
Putative secreted esterase.
  
  
  0.586
Lpar_0108
Phosphotransferase enzyme family protein.
  
     0.581
Lpar_0138
Uncharacterized protein; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
  
     0.578
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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