STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_3209Hypothetical protein. (559 aa)    
Predicted Functional Partners:
pta_2
Phosphate acetyl/butaryl transferase.
 
 0.852
pta_1
Poly(3-hydroxybutyrate) depolymerase.
    
 0.813
hcr
Oxidoreductase, FAD-binding protein.
  
  
  0.751
Lpar_1623
acyl-CoA synthetase.
   
 
 0.728
yfcX
Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.703
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.703
pta
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
 
  0.692
Lpar_1075
Patatin-like phospholipase.
  
     0.614
Lpar_2078
Phospholipase, patatin family.
  
     0.535
Lpar_3210
Hypothetical protein.
       0.481
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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