STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
relEToxin of the RelE-RelB toxin-antitoxin system. (94 aa)    
Predicted Functional Partners:
dinJ
Antitoxin DinJ.
  
 
 0.906
higA-2
Putative Antitoxin higA-2.
 
 
 
 0.882
Lpar_3214
Hypothetical protein.
       0.800
Lpar_1056
Hypothetical protein.
  
    0.669
Lpar_1266
Cyclic nucleotide-binding protein.
  
     0.591
Lpar_1869
Ankyrin repeat protein.
  
     0.571
Lpar_1959
Hypothetical protein.
  
     0.563
Lpar_1102
Coiled-coil protein.
  
     0.546
Lpar_2617
Substrate of the Dot/Icm secretion system.
  
     0.530
ybiA
Swarming motility protein YbiA.
  
     0.527
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.