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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_3239Hypothetical protein. (316 aa)    
Predicted Functional Partners:
secA_2
Coiled-coil protein.
 
     0.748
Lpar_2902
Putative CoA-dependent acyltransferase.
  
     0.737
iraA
Small-molecule methyltransferase IraA.
  
     0.724
Lpar_2405
Hypothetical protein.
  
     0.701
xynY
Endo-1,4-beta-xylanase Y precursor.
  
     0.696
aprX
Subtilisin-like serine protease.
  
 
   0.693
Lpar_1505
Ankyrin repeats (3 copies).
  
     0.681
Lpar_2168
Hypothetical protein.
  
     0.679
ankX_1
Ankyrin repeat-containing protein.
  
 
  0.668
Lpar_1362
Hypothetical protein.
  
     0.652
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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