STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lpar_3279Transmembrane protein. (277 aa)    
Predicted Functional Partners:
Lpar_3278
Antirestriction protein.
       0.531
Lpar_2086
Hypothetical protein.
  
     0.520
Lpar_0411
Calcium-transporting ATPase.
  
   0.479
Lpar_2394
Ankyrin repeats (3 copies).
  
 
   0.468
ssb_2
Single strand DNA binding protein.
  
    0.434
Lpar_0489
Protein kinase.
  
     0.433
Lpar_3015
PAP2 superfamily protein.
  
   0.422
smc_3
Chromosome partition protein Smc.
  
     0.417
celC
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.402
Your Current Organism:
Legionella parisiensis
NCBI taxonomy Id: 45071
Other names: ATCC 35299, CCUG 29670, CIP 103847, DSM 19216, JCM 7561, L. parisiensis, Legionella parisensis, NCTC 11983, strain PF-209C-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.