STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabFnHypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (425 aa)    
Predicted Functional Partners:
fabA
(3R)-hydroxymyristoyl-ACP dehydratase.
 
 0.982
Lqua_3431
Saframycin Mx1 synthetase B.
  
 0.979
fabD_1
Malonyl CoA-ACP transacylase.
 0.967
fabZ
(3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
 
 0.965
fabD_2
Malonyl CoA-ACP transacylase.
 0.963
acpP_1
Acyl carrier protein.
  
  0.953
fenF
Putative malonyl-CoA acyl-carrier-protein transacylase.
 
 0.949
arnA
Peptide synthetase, non-ribosomal.
  
 0.949
Lqua_3279
Acetyltransferase.
  
 0.949
fAA1_1
AMP-binding protein.
  
 0.943
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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