STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkJAlcohol dehydrogenase (acceptor). (524 aa)    
Predicted Functional Partners:
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.967
cycA
Cytochrome c.
   
 0.958
Lqua_1869
Serine/threonine protein kinase.
    
 0.949
yjeA
Endo-1,4-beta-xylanase-like protein.
    
  0.925
Lqua_2790
Serine/threonine protein kinase.
    
  0.925
Lqua_0204
Hypothetical protein.
    
  0.905
Lqua_0954
Tetratricopeptide repeat protein.
    
  0.905
Lqua_1713
TPR repeat containing protein.
    
  0.905
Lqua_1714
Hypothetical protein.
    
  0.905
Lqua_1861
Hypothetical protein.
    
  0.905
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.