STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
proA_1Zinc metalloproteinase precursor; Extracellular zinc metalloprotease. (544 aa)    
Predicted Functional Partners:
lasB_1
Class 4 metalloprotease; Extracellular zinc metalloprotease.
  
  
 
0.534
lasB_2
Virulence metalloprotease; Extracellular zinc metalloprotease.
  
  
 
0.525
Lqua_0277
Hypothetical protein.
   
    0.483
Lqua_1676
Aminopeptidase.
 
    0.473
Lqua_2840
Cysteine protease.
  
     0.473
Lqua_1675
Aminopeptidase.
 
    0.455
Lqua_0139
Protein IcmE (DotG).
  
     0.452
Lqua_2646
Leucine aminopeptidase.
 
    0.447
yghD
Putative general secretion pathway protein YghD.
  
     0.408
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.