STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydjZ_1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
merA
Hypothetical protein.
  
  0.996
lpdA
Dihydrolipoamide dehydrogenase.
   
  0.951
gor
Glutathione reductase.
   
  0.921
Lqua_0184
Phosphatidylcholine hydrolyzing phospholipase.
       0.768
Lqua_3279
Acetyltransferase.
    
 0.707
aas
2-acylglycerophosphoethanolamine acyltransferase.
    
 0.688
cdsA_1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
  0.683
Lqua_0250
Sterol desaturase.
 
     0.664
ynjF
Cytochrome oxidase-like protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
  0.650
gcsA
Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
   
 
  0.584
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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