STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_0281FAD binding domain protein. (677 aa)    
Predicted Functional Partners:
cmdD_2
Peptide synthetase, non-ribosomal.
  
 0.832
hmp
Oxidoreductase, FAD-binding protein.
     
 0.778
ndoR
Xylene monooxygenase.
     
 0.714
ispB_1
Octaprenyl-diphosphate synthase.
    
 0.683
cmdD_1
Peptide synthetase, non-ribosomal.
    
 0.680
Lqua_3431
Saframycin Mx1 synthetase B.
   
 
 0.642
Lqua_1788
Cytochrome P450.
   
 0.544
Lqua_0250
Sterol desaturase.
   
  0.505
Lqua_1521
Fatty acid hydroxylase superfamily protein.
   
  0.505
Lqua_3438
Sterol desaturase.
   
  0.505
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.