Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_0366Hypothetical protein. (61 aa)    
Predicted Functional Partners:
Lqua_0365
Hypothetical protein.
 
     0.651
copA2
Copper efflux ATPase.
       0.542
Lqua_0367
Putative addiction module antidote protein, family (containing the CopG/Arc/MetJ DNA-binding domain).
       0.458
Lqua_0368
Plasmid stabilization system protein.
       0.458
Lqua_0724
Hypothetical protein.
  
     0.457
pilE_1-2
Fimbrial protein, type IV pilin, PilE; Belongs to the N-Me-Phe pilin family.
  
     0.442
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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