STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_0382Transcriptional regulator. (121 aa)    
Predicted Functional Partners:
cadI_1
Cadmium-induced protein CadI.
 
     0.899
arsC2_1
Arsenate-mycothiol transferase ArsC2; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.824
Lqua_0385
Sodium Bile acid symporter family protein.
  
  
 0.822
cadI_2
Cadmium-induced protein CadI.
 
     0.569
arsA
Arsenical pump-driving ATPase; Anion-transporting ATPase; Belongs to the arsA ATPase family.
    
 0.521
pacS
Cation transport ATPase.
  
  
 0.500
higB
Toxin higB-2.
       0.481
Lqua_0387
Putative Antitoxin higA-2.
       0.481
birA
biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
     
 0.473
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.411
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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