STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadI_1Cadmium-induced protein CadI. (156 aa)    
Predicted Functional Partners:
Lqua_0382
Transcriptional regulator.
 
     0.899
arsC2_1
Arsenate-mycothiol transferase ArsC2; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
    0.799
Lqua_0385
Sodium Bile acid symporter family protein.
  
    0.793
ndoR
Xylene monooxygenase.
   
 
 0.774
baeB
Putative glyoxalase II family protein.
     
 0.735
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 
 0.730
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.714
cfiA
Oxaloacetate decarboxylase subunit alpha.
    
 0.702
Lqua_3206
IAA acetyltransferase/MarR transcriptional regulatory protein.
    
  0.584
czrA
Transcriptional regulator.
 
     0.555
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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