STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_0389Hypothetical protein. (157 aa)    
Predicted Functional Partners:
gsiD
Peptide ABC transporter permease.
  
 
 0.959
hbpA
Extracellular solute-binding protein.
  
 0.868
Lqua_2252
T-complex protein 10 C-terminus.
  
 0.868
xerC
Tyrosine recombinase XerC.
       0.797
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.796
gsiA
ABC dipeptide/oligopeptide/nickel transport, ATPase component; Belongs to the ABC transporter superfamily.
  
 
 0.734
artM
ABC transporter ATP-binding protein.
     
 0.621
Lqua_3137
Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat).
    
  0.439
Lqua_3475
UVB-resistance protein UVR8.
    
  0.439
ccmA_1
ABC transporter ATP binding protein.
    
  0.404
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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