STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traC_4Putative conjugative transfer protein TraC. (849 aa)    
Predicted Functional Partners:
Lqua_0438
Putative conjugative transfer protein TraW.
 
     0.951
Lqua_0437
Putative conjugative transfer protein TraU.
 
     0.950
Lqua_0431
Putative sex pilus assembly and mating pair protein TraG.
 
     0.949
Lqua_0434
Putative conjugative transfer protein TraF.
 
     0.949
Lqua_0435
Conjugal transfer mating pair stabilization protein TraN.
 
     0.949
Lqua_0436
Putative conjugative transfer protein TrbC.
 
     0.949
Lqua_0432
Putative conjugative transfer protein TraH.
 
     0.948
Lqua_0442
Putative conjugative transfer protein TraB.
 
     0.933
traD_4
Conjugative transfer protein TraD.
 
    0.896
traI_4
Putative conjugative transfer protein TraI.
 
     0.885
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.